/** * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see * . * * (c) Vincenzo Nicosia 2009-2017 -- * * This file is part of NetBunch, a package for complex network * analysis and modelling. For more information please visit: * * http://www.complex-networks.net/ * * If you use this software, please add a reference to * * V. Latora, V. Nicosia, G. Russo * "Complex Networks: Principles, Methods and Applications" * Cambridge University Press (2017) * ISBN: 9781107103184 * *********************************************************************** * * This program samples a simple graph (i.e., without self-loops * and/or multiple edges) from the configuration model, using the * degree sequence provided as input. * */ #include #include #include #include #include "utils.h" #include "iltree_double.h" #define MAXREJECTS 1000000 /* Usage */ void usage(char *argv[]){ printf("********************************************************************\n" "** **\n" "** -*- conf_model_deg -*- **\n" "** **\n" "** Sample a simple graph from the configuration model associated **\n" "** to the degree sequence provided as input. **\n" "** **\n" "** The degree sequence is a file with format: **\n" "** **\n" "** k_1 **\n" "** k_2 **\n" "** k_3 **\n" "** .... **\n" "** k_N **\n" "** **\n" "** where 'k_i' is the degree of the i-th node. The program **\n" "** prints on output the edge-list of the resulting graph. **\n" "** **\n" "** The second (optional) parameter 'threshold' indicates the **\n" "** number of edge stubs that are allowed to remain unmatched **\n" "** in the final graph. This parameter might be used to **\n" "** obtain a graph from a too-constrained degree sequence, e.g., **\n" "** a power-law sequence whose maximum degree is larger than **\n" "** the structural cut-off. **\n" "** **\n" "********************************************************************\n" " This is Free Software - You can use and distribute it under \n" " the terms of the GNU General Public License, version 3 or later\n\n" " Please visit http://www.complex-networks.net for more information\n\n" " (c) Vincenzo Nicosia 2010-2017 (v.nicosia@qmul.ac.uk)\n" "********************************************************************\n\n" ); printf("Usage: %s []\n\n" , argv[0]); } unsigned int count_stubs(unsigned int *nodes, int N){ int i; unsigned int cnt; cnt = 0; for (i=0; i 0 && countreject < MAXREJECTS){ /* sample the first stub */ L1 = rand() % S; I1 = stubs[L1]; S -= 1; /* sample the second stub */ L2 = rand() % S; I2 = stubs[L2]; S -= 1; if (L1 == L2){/* If L1 and L2 are the same element, discard the sample */ /* reset S to the value it had before */ S += 2; continue; } if (I1 == I2){ /* reject the pair: it's the same node! */ countreject += 1; /* reset S to the value it had before */ S += 2; continue; } if (I1 > I2){ /* we require that I1 < I2 */ tmp = I2; I2 = I1; I1 = tmp; } k = 1.0 * (I2)* (I2-1) / 2 + I1 + 1; /* This number represents the couple I1, I2 (I1 < I2)*/ if (!iltree_lookup(*t, &k)){ /* The element "k" is not yet present in the BST*/ /* We can accept the new pair... */ /* ...so we insert it into the tree */ iltree_insert(*t, &k); /* remove the two stubs */ tmp = stubs[L1]; stubs[L1] = stubs[S+1]; stubs[S+1] = tmp; tmp = stubs[L2]; stubs[L2] = stubs[S]; stubs[S] = tmp; } else{/* reject the pair */ /* reset S to the value it had before */ countreject += 1; S += 2; } } /* Let's check if we got a graph....*/ if (countreject >= MAXREJECTS){ if (S <= thresh){ fprintf(stderr, "Found a graph (unmatched stubs: %d <= threshold: %d)\n", S, thresh); break; } else{ fprintf(stderr, "Graph not found (unmatched stubs: %d > threshold: %d)\n", S, thresh); S = 0; countreject = 0; tmp_file = iltree_get_fileout(*t); iltree_destroy(*t); *t = NULL; *t = iltree_double_init(*t, tmp_file); } } else{ fprintf(stderr, "Found a graph!\n"); break; } } while(1); free(stubs); } int main(int argc, char *argv[]){ unsigned int *nodes= NULL; int N; iltree_t t = NULL; FILE *filein; unsigned int thresh; if (argc < 2){ usage(argv); exit(1); } srand(time(NULL)); if (!strcmp(argv[1], "-")){ /* take the input from STDIN */ filein = stdin; } else { filein = openfile_or_exit(argv[1], "r", 2); } if (argc > 2) /* Set the threshold */ thresh = atoi(argv[2]); else thresh = 0; t = iltree_double_init(t, stdout); N = read_deg_seq(filein, &nodes); sample_graph_conf(nodes, N, &t, thresh); iltree_double_dump_edges(t); fclose(filein); free(nodes); iltree_destroy(t); }