From df8386f75b0538075d72d52693836bb8878f505b Mon Sep 17 00:00:00 2001 From: KatolaZ Date: Mon, 19 Oct 2015 16:23:00 +0100 Subject: First commit of MAMMULT code --- structure/activity/node_activity_vectors.py | 68 +++++++++++++++++++++++++++++ 1 file changed, 68 insertions(+) create mode 100644 structure/activity/node_activity_vectors.py (limited to 'structure/activity/node_activity_vectors.py') diff --git a/structure/activity/node_activity_vectors.py b/structure/activity/node_activity_vectors.py new file mode 100644 index 0000000..9839334 --- /dev/null +++ b/structure/activity/node_activity_vectors.py @@ -0,0 +1,68 @@ +#### +## +## Take as input the layers of a multiplex, and provide as output a +## file where the n-th line contains the degrees of the n-th node at +## each layer, separated by a space, in the format: +## +## node1_deglay1 node1_deglay2 .... node1_deglayM +## node2_deglay1 node2_deglay2 .... node2_deglayM +## .............................................. +## nodeN_deglay1 nodeN_deglay2 .... nodeN_deglayM +## +## + +import sys + +if len(sys.argv) < 2: + print "Usage: %s [...]" % sys.argv[0] + sys.exit(1) + +node_degrees = {} + +max_N = -1 + +num_layer = 0 + +for layer in sys.argv[1:]: + with open(layer, "r") as lines: + for l in lines: + if l[0] == "#": + continue + + s, d = [int(x) for x in l.strip(" \n").split(" ")[:2]] + + if s > max_N: + max_N = s + if d > max_N: + max_N = d + + if s in node_degrees: + if num_layer in node_degrees[s]: + node_degrees[s][num_layer] += 1 + else: + node_degrees[s][num_layer] = 1 + else: + node_degrees[s] = {} + node_degrees[s][num_layer] = 1 + + if d in node_degrees: + if num_layer in node_degrees[d]: + node_degrees[d][num_layer] += 1 + else: + node_degrees[d][num_layer] = 1 + else: + node_degrees[d] = {} + node_degrees[d][num_layer] = 1 + num_layer += 1 + + +for n in range(max_N+1): + for i in range(num_layer): + if n in node_degrees: + if i in node_degrees[n]: + print 1, + else: + print 0, + else: + print 0, + print -- cgit v1.2.3