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authorKatolaZ <katolaz@yahoo.it>2015-10-19 16:56:08 +0100
committerKatolaZ <katolaz@yahoo.it>2015-10-19 16:56:08 +0100
commitdf851f00ace4329f031af3215a531652c686b7f5 (patch)
treeedf33069dab78da4f6ea19a39588ec614d13f16b
parenta86962cbfd0321387c920a04188512d0de2f3036 (diff)
- Added header with LICENSE statement to all the source files
- Added INSTALL file - Amended the README file
-rw-r--r--INSTALL32
-rw-r--r--README.md14
-rwxr-xr-xdynamics/ising/iltree.c16
-rw-r--r--dynamics/ising/multiplex_ising.c16
-rwxr-xr-xdynamics/ising/utils.c16
-rwxr-xr-xdynamics/randomwalks/entropyrate2add.c16
-rwxr-xr-xdynamics/randomwalks/entropyrate2int.c16
-rwxr-xr-xdynamics/randomwalks/entropyrate2mult.c16
-rwxr-xr-xdynamics/randomwalks/iltree.c16
-rwxr-xr-xdynamics/randomwalks/iltree.h16
-rwxr-xr-xdynamics/randomwalks/statdistr2.c16
-rwxr-xr-xdynamics/randomwalks/utils.c16
-rwxr-xr-xdynamics/randomwalks/utils.h16
-rw-r--r--models/correlations/fit_utils.c16
-rw-r--r--models/correlations/fit_utils.h16
-rw-r--r--models/correlations/rank_utils.c16
-rw-r--r--models/correlations/rank_utils.h16
-rw-r--r--models/correlations/tune_qnn_adaptive.c16
-rw-r--r--models/correlations/tune_rho.c16
-rw-r--r--models/growth/nibilab_linear_delay.c16
-rw-r--r--models/growth/nibilab_linear_delay_mix.c16
-rw-r--r--models/growth/nibilab_linear_delta.c16
-rw-r--r--models/growth/nibilab_linear_random_times.c16
-rw-r--r--models/growth/nibilab_nonlinear.c16
-rw-r--r--models/growth/node_deg_over_time.py14
-rw-r--r--models/nullmodels/model_MDM.py14
-rw-r--r--models/nullmodels/model_MSM.py14
-rw-r--r--models/nullmodels/model_hypergeometric.py14
-rw-r--r--models/nullmodels/model_layer_growth.py14
-rw-r--r--structure/activity/degs_to_activity_overlap.py14
-rw-r--r--structure/activity/degs_to_binary.py14
-rw-r--r--structure/activity/hamming_dist.py14
-rw-r--r--structure/activity/layer_activity.py14
-rw-r--r--structure/activity/layer_activity_vectors.py14
-rw-r--r--structure/activity/multiplexity.py14
-rw-r--r--structure/activity/node_activity.py14
-rw-r--r--structure/activity/node_activity_vectors.py14
-rw-r--r--structure/activity/node_degree_vectors.py14
-rw-r--r--structure/correlations/compute_pearson.py14
-rw-r--r--structure/correlations/compute_rho.py14
-rw-r--r--structure/correlations/compute_tau.py14
-rw-r--r--structure/correlations/dump_k_q.c16
-rw-r--r--structure/correlations/fit_knn.c16
-rw-r--r--structure/correlations/fit_utils.c16
-rw-r--r--structure/correlations/fit_utils.h16
-rw-r--r--structure/correlations/knn_q_from_degrees.py14
-rw-r--r--structure/correlations/knn_q_from_layers.py14
-rw-r--r--structure/correlations/rank_nodes.py14
-rw-r--r--structure/correlations/rank_nodes_thresh.py14
-rw-r--r--structure/correlations/rank_occurrence.py14
-rw-r--r--structure/correlations/rank_utils.c16
-rw-r--r--structure/correlations/rank_utils.h16
-rw-r--r--structure/metrics/aggregate_layers_w.py14
-rw-r--r--structure/metrics/avg_edge_overlap.py14
-rw-r--r--structure/metrics/cartography_from_columns.py14
-rw-r--r--structure/metrics/cartography_from_deg_vectors.py14
-rw-r--r--structure/metrics/cartography_from_layers.py14
-rw-r--r--structure/metrics/edge_overlap.py14
-rw-r--r--structure/metrics/intersect_layers.py14
-rw-r--r--structure/metrics/overlap_degree.py14
-rw-r--r--structure/reinforcement/reinforcement.py14
61 files changed, 928 insertions, 0 deletions
diff --git a/INSTALL b/INSTALL
new file mode 100644
index 0000000..aa895b4
--- /dev/null
+++ b/INSTALL
@@ -0,0 +1,32 @@
+==== MAMMULT: Metrics And Models for MULTilayer networks ====
+
+Most of the programs included in this version of the MAMMULT
+package are in Python, thus no installation at all is needed.
+It is sufficient to copy the .py files in the desired directory
+and use them.
+
+Python code requires the following packages to be installed in
+your system:
+
+ SciPy
+ Numpy
+ Networkx
+
+All the code should work with any recent version of those packages.
+
+
+Makefiles are available for all C code in the corresponding
+directories, namely:
+
+ structure/correlations/
+ models/correlations/
+ models/growth/
+ dynamics/ising/
+ dynamics/randomwalks/
+
+In order to compile C programs it is sufficient to move to the
+corresponding directory and give the command:
+
+ $ make
+
+which will compile all the executables.
diff --git a/README.md b/README.md
index ac647e1..01cd4bc 100644
--- a/README.md
+++ b/README.md
@@ -1,2 +1,16 @@
# mammult
Metrics And Models for MULTilayer networks
+
+MAMMULT is a collection of programs for the analysis and modelling of
+multi-layer networks. Most of the code included in this package was
+developed during the EU FET project "LASAGNE".
+
+MAMMULT is Free Software, and can be used, copied, modified and
+distributed under the terms of the GNU General Public Licence, version
+3. A copy of the GNU General Public License is available in the file
+COPYING.
+
+
+(c) Vincenzo Nicosia 2012-2015 <v.nicosia@qmul.ac.uk>
+ Federico Battiston 2013-2015 <battiston.federico@gmail.com>
+
diff --git a/dynamics/ising/iltree.c b/dynamics/ising/iltree.c
index 5a693d0..fa75df6 100755
--- a/dynamics/ising/iltree.c
+++ b/dynamics/ising/iltree.c
@@ -1,4 +1,20 @@
/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+/*
*
* A simple insert-lookup static btree datatype
*
diff --git a/dynamics/ising/multiplex_ising.c b/dynamics/ising/multiplex_ising.c
index 8dbbf68..cf9e538 100644
--- a/dynamics/ising/multiplex_ising.c
+++ b/dynamics/ising/multiplex_ising.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#include <stdio.h>
#include <stdlib.h>
#include <time.h>
diff --git a/dynamics/ising/utils.c b/dynamics/ising/utils.c
index 952fcd7..bce3092 100755
--- a/dynamics/ising/utils.c
+++ b/dynamics/ising/utils.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#include "iltree.h"
#include <stdlib.h>
#include <math.h>
diff --git a/dynamics/randomwalks/entropyrate2add.c b/dynamics/randomwalks/entropyrate2add.c
index fae4fc8..1153308 100755
--- a/dynamics/randomwalks/entropyrate2add.c
+++ b/dynamics/randomwalks/entropyrate2add.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#include <stdio.h>
#include <stdlib.h>
#include <math.h>
diff --git a/dynamics/randomwalks/entropyrate2int.c b/dynamics/randomwalks/entropyrate2int.c
index 757c7b7..c836ed8 100755
--- a/dynamics/randomwalks/entropyrate2int.c
+++ b/dynamics/randomwalks/entropyrate2int.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#include <stdio.h>
#include <stdlib.h>
#include <math.h>
diff --git a/dynamics/randomwalks/entropyrate2mult.c b/dynamics/randomwalks/entropyrate2mult.c
index cded4eb..ea6e435 100755
--- a/dynamics/randomwalks/entropyrate2mult.c
+++ b/dynamics/randomwalks/entropyrate2mult.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#include <stdio.h>
#include <stdlib.h>
#include <math.h>
diff --git a/dynamics/randomwalks/iltree.c b/dynamics/randomwalks/iltree.c
index 5a693d0..fa75df6 100755
--- a/dynamics/randomwalks/iltree.c
+++ b/dynamics/randomwalks/iltree.c
@@ -1,4 +1,20 @@
/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+/*
*
* A simple insert-lookup static btree datatype
*
diff --git a/dynamics/randomwalks/iltree.h b/dynamics/randomwalks/iltree.h
index 3e835e4..6050f03 100755
--- a/dynamics/randomwalks/iltree.h
+++ b/dynamics/randomwalks/iltree.h
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#ifndef __ILTREE_H__
#define __ILTREE_H__
diff --git a/dynamics/randomwalks/statdistr2.c b/dynamics/randomwalks/statdistr2.c
index 10528da..55bbb35 100755
--- a/dynamics/randomwalks/statdistr2.c
+++ b/dynamics/randomwalks/statdistr2.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#include <stdio.h>
#include <stdlib.h>
#include <math.h>
diff --git a/dynamics/randomwalks/utils.c b/dynamics/randomwalks/utils.c
index 952fcd7..bce3092 100755
--- a/dynamics/randomwalks/utils.c
+++ b/dynamics/randomwalks/utils.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#include "iltree.h"
#include <stdlib.h>
#include <math.h>
diff --git a/dynamics/randomwalks/utils.h b/dynamics/randomwalks/utils.h
index c844248..c87e92e 100755
--- a/dynamics/randomwalks/utils.h
+++ b/dynamics/randomwalks/utils.h
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#ifndef __UTILS_H__
#define __UTILS_H__
diff --git a/models/correlations/fit_utils.c b/models/correlations/fit_utils.c
index e9e3954..6b7609d 100644
--- a/models/correlations/fit_utils.c
+++ b/models/correlations/fit_utils.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Fit a given sequence with a power-law function
diff --git a/models/correlations/fit_utils.h b/models/correlations/fit_utils.h
index 183f47c..82287c7 100644
--- a/models/correlations/fit_utils.h
+++ b/models/correlations/fit_utils.h
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#ifndef __FIT_UTILS_H__
#define __FIT_UTILS_H__
diff --git a/models/correlations/rank_utils.c b/models/correlations/rank_utils.c
index 4b8ef41..b25f976 100644
--- a/models/correlations/rank_utils.c
+++ b/models/correlations/rank_utils.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Some utility functions to be used with tune_rho, compute_rho and
diff --git a/models/correlations/rank_utils.h b/models/correlations/rank_utils.h
index 521582a..4b9296a 100644
--- a/models/correlations/rank_utils.h
+++ b/models/correlations/rank_utils.h
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#ifndef __RANK_UTILS_H__
#define __RANK_UTILS_H__
diff --git a/models/correlations/tune_qnn_adaptive.c b/models/correlations/tune_qnn_adaptive.c
index 71643a1..f645dbe 100644
--- a/models/correlations/tune_qnn_adaptive.c
+++ b/models/correlations/tune_qnn_adaptive.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Tune the inter-layer degree correlation function \bar{q}(k) of a
diff --git a/models/correlations/tune_rho.c b/models/correlations/tune_rho.c
index 4495b0e..0e681c9 100644
--- a/models/correlations/tune_rho.c
+++ b/models/correlations/tune_rho.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Tune the Spearman's \rho correlation coefficient between two rankings
diff --git a/models/growth/nibilab_linear_delay.c b/models/growth/nibilab_linear_delay.c
index 518b09d..55bf206 100644
--- a/models/growth/nibilab_linear_delay.c
+++ b/models/growth/nibilab_linear_delay.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* NiBiLaB model (Nicosia, Bianconi, Latora, Barthelemy) of multiplex
diff --git a/models/growth/nibilab_linear_delay_mix.c b/models/growth/nibilab_linear_delay_mix.c
index e48d16b..0946344 100644
--- a/models/growth/nibilab_linear_delay_mix.c
+++ b/models/growth/nibilab_linear_delay_mix.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* NiBiLaB model (Nicosia, Bianconi, Latora, Barthelemy) of multiplex
diff --git a/models/growth/nibilab_linear_delta.c b/models/growth/nibilab_linear_delta.c
index b1f7e90..cf8fc70 100644
--- a/models/growth/nibilab_linear_delta.c
+++ b/models/growth/nibilab_linear_delta.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* NiBiLaB model (Nicosia, Bianconi, Latora, Barthelemy) of multiplex
diff --git a/models/growth/nibilab_linear_random_times.c b/models/growth/nibilab_linear_random_times.c
index 48929aa..c2504f6 100644
--- a/models/growth/nibilab_linear_random_times.c
+++ b/models/growth/nibilab_linear_random_times.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* NiBiLaB model (Nicosia, Bianconi, Latora, Barthelemy) of multiplex
diff --git a/models/growth/nibilab_nonlinear.c b/models/growth/nibilab_nonlinear.c
index 3ad9ce8..1c8e818 100644
--- a/models/growth/nibilab_nonlinear.c
+++ b/models/growth/nibilab_nonlinear.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* NiBiLaB model (Nicosia, Bianconi, Latora, Barthelemy) of multiplex
diff --git a/models/growth/node_deg_over_time.py b/models/growth/node_deg_over_time.py
index a71e86c..8b3a2f1 100644
--- a/models/growth/node_deg_over_time.py
+++ b/models/growth/node_deg_over_time.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Get an edgelist, a file pof arrival times and a node ID and return
diff --git a/models/nullmodels/model_MDM.py b/models/nullmodels/model_MDM.py
index 5b0a969..26bd392 100644
--- a/models/nullmodels/model_MDM.py
+++ b/models/nullmodels/model_MDM.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
##
diff --git a/models/nullmodels/model_MSM.py b/models/nullmodels/model_MSM.py
index 2c30df5..528cd48 100644
--- a/models/nullmodels/model_MSM.py
+++ b/models/nullmodels/model_MSM.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
##
diff --git a/models/nullmodels/model_hypergeometric.py b/models/nullmodels/model_hypergeometric.py
index 0a36237..bcc3024 100644
--- a/models/nullmodels/model_hypergeometric.py
+++ b/models/nullmodels/model_hypergeometric.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## This is the hypergeometric model. Each layer has the same number of
diff --git a/models/nullmodels/model_layer_growth.py b/models/nullmodels/model_layer_growth.py
index 46b4c0f..024812b 100644
--- a/models/nullmodels/model_layer_growth.py
+++ b/models/nullmodels/model_layer_growth.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## layer-by-layer multiplex growth
diff --git a/structure/activity/degs_to_activity_overlap.py b/structure/activity/degs_to_activity_overlap.py
index c96959b..7750ed6 100644
--- a/structure/activity/degs_to_activity_overlap.py
+++ b/structure/activity/degs_to_activity_overlap.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take a file which contains, on the n-th line, the degrees at each
diff --git a/structure/activity/degs_to_binary.py b/structure/activity/degs_to_binary.py
index cb7aef5..6c299d1 100644
--- a/structure/activity/degs_to_binary.py
+++ b/structure/activity/degs_to_binary.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take a file which contains, on the n-th line, the degrees at each
diff --git a/structure/activity/hamming_dist.py b/structure/activity/hamming_dist.py
index 2a98e64..a18f732 100644
--- a/structure/activity/hamming_dist.py
+++ b/structure/activity/hamming_dist.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input the layers of a multiplex, and provide as output a
diff --git a/structure/activity/layer_activity.py b/structure/activity/layer_activity.py
index bea0416..b0c0570 100644
--- a/structure/activity/layer_activity.py
+++ b/structure/activity/layer_activity.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input the layers of a multiplex, and provide as output a
diff --git a/structure/activity/layer_activity_vectors.py b/structure/activity/layer_activity_vectors.py
index f32418d..f3f756d 100644
--- a/structure/activity/layer_activity_vectors.py
+++ b/structure/activity/layer_activity_vectors.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input the layers of a multiplex, and provide as output a
diff --git a/structure/activity/multiplexity.py b/structure/activity/multiplexity.py
index 9e038c9..583fe37 100644
--- a/structure/activity/multiplexity.py
+++ b/structure/activity/multiplexity.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input the layers of a multiplex, and provide as output a
diff --git a/structure/activity/node_activity.py b/structure/activity/node_activity.py
index 6410a68..86da033 100644
--- a/structure/activity/node_activity.py
+++ b/structure/activity/node_activity.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input the layers of a multiplex, and provide as output a
diff --git a/structure/activity/node_activity_vectors.py b/structure/activity/node_activity_vectors.py
index 9839334..7131247 100644
--- a/structure/activity/node_activity_vectors.py
+++ b/structure/activity/node_activity_vectors.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input the layers of a multiplex, and provide as output a
diff --git a/structure/activity/node_degree_vectors.py b/structure/activity/node_degree_vectors.py
index 8863daa..0818103 100644
--- a/structure/activity/node_degree_vectors.py
+++ b/structure/activity/node_degree_vectors.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input the layers of a multiplex, and provide as output a
diff --git a/structure/correlations/compute_pearson.py b/structure/correlations/compute_pearson.py
index e2c9055..e83466d 100644
--- a/structure/correlations/compute_pearson.py
+++ b/structure/correlations/compute_pearson.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Compute the pearson correlation coefficient between the values of
diff --git a/structure/correlations/compute_rho.py b/structure/correlations/compute_rho.py
index 8fa4174..59337db 100644
--- a/structure/correlations/compute_rho.py
+++ b/structure/correlations/compute_rho.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Get two rankings and a pairing, and compute the corresponding
diff --git a/structure/correlations/compute_tau.py b/structure/correlations/compute_tau.py
index 3d1f804..c4e47b1 100644
--- a/structure/correlations/compute_tau.py
+++ b/structure/correlations/compute_tau.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input two files, whose n^th line contains the ranking of
diff --git a/structure/correlations/dump_k_q.c b/structure/correlations/dump_k_q.c
index 2b6ba79..4ac189f 100644
--- a/structure/correlations/dump_k_q.c
+++ b/structure/correlations/dump_k_q.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Get the degree distributions of two layers and a pairing, and dump
diff --git a/structure/correlations/fit_knn.c b/structure/correlations/fit_knn.c
index 64fc4c3..67d3b9a 100644
--- a/structure/correlations/fit_knn.c
+++ b/structure/correlations/fit_knn.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Take a file which contains pairs in the form:
diff --git a/structure/correlations/fit_utils.c b/structure/correlations/fit_utils.c
index e9e3954..6b7609d 100644
--- a/structure/correlations/fit_utils.c
+++ b/structure/correlations/fit_utils.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Fit a given sequence with a power-law function
diff --git a/structure/correlations/fit_utils.h b/structure/correlations/fit_utils.h
index 183f47c..82287c7 100644
--- a/structure/correlations/fit_utils.h
+++ b/structure/correlations/fit_utils.h
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#ifndef __FIT_UTILS_H__
#define __FIT_UTILS_H__
diff --git a/structure/correlations/knn_q_from_degrees.py b/structure/correlations/knn_q_from_degrees.py
index 5e10bfa..bd81dcd 100644
--- a/structure/correlations/knn_q_from_degrees.py
+++ b/structure/correlations/knn_q_from_degrees.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
##
diff --git a/structure/correlations/knn_q_from_layers.py b/structure/correlations/knn_q_from_layers.py
index c108c18..ce55086 100644
--- a/structure/correlations/knn_q_from_layers.py
+++ b/structure/correlations/knn_q_from_layers.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
##
diff --git a/structure/correlations/rank_nodes.py b/structure/correlations/rank_nodes.py
index 6985e88..dda5d82 100644
--- a/structure/correlations/rank_nodes.py
+++ b/structure/correlations/rank_nodes.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
##
diff --git a/structure/correlations/rank_nodes_thresh.py b/structure/correlations/rank_nodes_thresh.py
index 44b565a..58d28a5 100644
--- a/structure/correlations/rank_nodes_thresh.py
+++ b/structure/correlations/rank_nodes_thresh.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
##
diff --git a/structure/correlations/rank_occurrence.py b/structure/correlations/rank_occurrence.py
index 6339d5d..7c707e0 100644
--- a/structure/correlations/rank_occurrence.py
+++ b/structure/correlations/rank_occurrence.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Get two rankings and compute the size of the k-intersection,
diff --git a/structure/correlations/rank_utils.c b/structure/correlations/rank_utils.c
index 4b8ef41..b25f976 100644
--- a/structure/correlations/rank_utils.c
+++ b/structure/correlations/rank_utils.c
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
/**
*
* Some utility functions to be used with tune_rho, compute_rho and
diff --git a/structure/correlations/rank_utils.h b/structure/correlations/rank_utils.h
index 521582a..4b9296a 100644
--- a/structure/correlations/rank_utils.h
+++ b/structure/correlations/rank_utils.h
@@ -1,3 +1,19 @@
+/*
+ * This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or (at
+ * your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
#ifndef __RANK_UTILS_H__
#define __RANK_UTILS_H__
diff --git a/structure/metrics/aggregate_layers_w.py b/structure/metrics/aggregate_layers_w.py
index cd5ea1d..a820ba0 100644
--- a/structure/metrics/aggregate_layers_w.py
+++ b/structure/metrics/aggregate_layers_w.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Aggregate the layers of a multiplex, weigthing each edge according
diff --git a/structure/metrics/avg_edge_overlap.py b/structure/metrics/avg_edge_overlap.py
index e68fd8b..7f7eb5b 100644
--- a/structure/metrics/avg_edge_overlap.py
+++ b/structure/metrics/avg_edge_overlap.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Compute the average edge overlap of a multiplex, i.e. the average
diff --git a/structure/metrics/cartography_from_columns.py b/structure/metrics/cartography_from_columns.py
index a2343ed..b41e491 100644
--- a/structure/metrics/cartography_from_columns.py
+++ b/structure/metrics/cartography_from_columns.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Make a cartography (i.e., sum and participation coefficient) based
diff --git a/structure/metrics/cartography_from_deg_vectors.py b/structure/metrics/cartography_from_deg_vectors.py
index c40d701..b55632b 100644
--- a/structure/metrics/cartography_from_deg_vectors.py
+++ b/structure/metrics/cartography_from_deg_vectors.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take as input a file containing, on each line, the degree vector of
diff --git a/structure/metrics/cartography_from_layers.py b/structure/metrics/cartography_from_layers.py
index b9c4584..5ec5449 100644
--- a/structure/metrics/cartography_from_layers.py
+++ b/structure/metrics/cartography_from_layers.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Compute the participation coefficient of each node of a multiplex
diff --git a/structure/metrics/edge_overlap.py b/structure/metrics/edge_overlap.py
index 1b27f55..4c3a676 100644
--- a/structure/metrics/edge_overlap.py
+++ b/structure/metrics/edge_overlap.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Compute the edge overlap of each edge of the multiplex, i.e. the
diff --git a/structure/metrics/intersect_layers.py b/structure/metrics/intersect_layers.py
index a9da00c..c339e21 100644
--- a/structure/metrics/intersect_layers.py
+++ b/structure/metrics/intersect_layers.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Take a certain number of networks as input and give as output the
diff --git a/structure/metrics/overlap_degree.py b/structure/metrics/overlap_degree.py
index fa69434..1f8a194 100644
--- a/structure/metrics/overlap_degree.py
+++ b/structure/metrics/overlap_degree.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
####
##
## Compute the overlapping degree for each node and the corresponding
diff --git a/structure/reinforcement/reinforcement.py b/structure/reinforcement/reinforcement.py
index 5939e59..d874c6e 100644
--- a/structure/reinforcement/reinforcement.py
+++ b/structure/reinforcement/reinforcement.py
@@ -1,3 +1,17 @@
+# This file is part of MAMMULT: Metrics And Models for Multilayer Networks
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or (at
+# your option) any later version.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
import networkx as nx
import sys