summaryrefslogtreecommitdiff
path: root/doc/bb_fitness.1.html
blob: ed7b162746bcfe4dac0a921b590bad96561ec4de (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
<!DOCTYPE html>
<html>
<head>
  <meta http-equiv='content-type' value='text/html;charset=utf8'>
  <meta name='generator' value='Ronn/v0.7.3 (http://github.com/rtomayko/ronn/tree/0.7.3)'>
  <title>bb_fitness(1) - Grow a random graph with the fitness model</title>
  <style type='text/css' media='all'>
  /* style: man */
  body#manpage {margin:0}
  .mp {max-width:100ex;padding:0 9ex 1ex 4ex}
  .mp p,.mp pre,.mp ul,.mp ol,.mp dl {margin:0 0 20px 0}
  .mp h2 {margin:10px 0 0 0}
  .mp > p,.mp > pre,.mp > ul,.mp > ol,.mp > dl {margin-left:8ex}
  .mp h3 {margin:0 0 0 4ex}
  .mp dt {margin:0;clear:left}
  .mp dt.flush {float:left;width:8ex}
  .mp dd {margin:0 0 0 9ex}
  .mp h1,.mp h2,.mp h3,.mp h4 {clear:left}
  .mp pre {margin-bottom:20px}
  .mp pre+h2,.mp pre+h3 {margin-top:22px}
  .mp h2+pre,.mp h3+pre {margin-top:5px}
  .mp img {display:block;margin:auto}
  .mp h1.man-title {display:none}
  .mp,.mp code,.mp pre,.mp tt,.mp kbd,.mp samp,.mp h3,.mp h4 {font-family:monospace;font-size:14px;line-height:1.42857142857143}
  .mp h2 {font-size:16px;line-height:1.25}
  .mp h1 {font-size:20px;line-height:2}
  .mp {text-align:justify;background:#fff}
  .mp,.mp code,.mp pre,.mp pre code,.mp tt,.mp kbd,.mp samp {color:#131211}
  .mp h1,.mp h2,.mp h3,.mp h4 {color:#030201}
  .mp u {text-decoration:underline}
  .mp code,.mp strong,.mp b {font-weight:bold;color:#131211}
  .mp em,.mp var {font-style:italic;color:#232221;text-decoration:none}
  .mp a,.mp a:link,.mp a:hover,.mp a code,.mp a pre,.mp a tt,.mp a kbd,.mp a samp {color:#0000ff}
  .mp b.man-ref {font-weight:normal;color:#434241}
  .mp pre {padding:0 4ex}
  .mp pre code {font-weight:normal;color:#434241}
  .mp h2+pre,h3+pre {padding-left:0}
  ol.man-decor,ol.man-decor li {margin:3px 0 10px 0;padding:0;float:left;width:33%;list-style-type:none;text-transform:uppercase;color:#999;letter-spacing:1px}
  ol.man-decor {width:100%}
  ol.man-decor li.tl {text-align:left}
  ol.man-decor li.tc {text-align:center;letter-spacing:4px}
  ol.man-decor li.tr {text-align:right;float:right}
  </style>
  <style type='text/css' media='all'>
  /* style: toc */
  .man-navigation {display:block !important;position:fixed;top:0;left:113ex;height:100%;width:100%;padding:48px 0 0 0;border-left:1px solid #dbdbdb;background:#eee}
  .man-navigation a,.man-navigation a:hover,.man-navigation a:link,.man-navigation a:visited {display:block;margin:0;padding:5px 2px 5px 30px;color:#999;text-decoration:none}
  .man-navigation a:hover {color:#111;text-decoration:underline}
  </style>
</head>
<!--
  The following styles are deprecated and will be removed at some point:
  div#man, div#man ol.man, div#man ol.head, div#man ol.man.

  The .man-page, .man-decor, .man-head, .man-foot, .man-title, and
  .man-navigation should be used instead.
-->
<body id='manpage'>
  <div class='mp' id='man'>

  <div class='man-navigation' style='display:none'>
    <a href="#NAME">NAME</a>
    <a href="#SYNOPSIS">SYNOPSIS</a>
    <a href="#DESCRIPTION">DESCRIPTION</a>
    <a href="#PARAMETERS">PARAMETERS</a>
    <a href="#OUTPUT">OUTPUT</a>
    <a href="#EXAMPLES">EXAMPLES</a>
    <a href="#SEE-ALSO">SEE ALSO</a>
    <a href="#REFERENCES">REFERENCES</a>
    <a href="#AUTHORS">AUTHORS</a>
  </div>

  <ol class='man-decor man-head man head'>
    <li class='tl'>bb_fitness(1)</li>
    <li class='tc'>www.complex-networks.net</li>
    <li class='tr'>bb_fitness(1)</li>
  </ol>

  <h2 id="NAME">NAME</h2>
<p class="man-name">
  <code>bb_fitness</code> - <span class="man-whatis">Grow a random graph with the fitness model</span>
</p>

<h2 id="SYNOPSIS">SYNOPSIS</h2>

<p><code>bb_fitness</code> <var>N</var> <var>m</var> <var>n0</var> [SHOW]</p>

<h2 id="DESCRIPTION">DESCRIPTION</h2>

<p><code>bb_fitness</code> grows an undirected random scale-free graph with <var>N</var>
nodes using the fitness model proposed by Bianconi and Barabasi. The
initial network is a clique of <var>n0</var> nodes, and each new node creates
<var>m</var> new edges. The probability that a new node create an edge to node
<code>j</code> is proportional to</p>

<pre><code>    a_j * k_j
</code></pre>

<p>where <code>a_j</code> is the attractiveness (fitness) of node <code>j</code>. The values of
node attractiveness are sampled uniformly in the interval [0,1].</p>

<h2 id="PARAMETERS">PARAMETERS</h2>

<dl>
<dt class="flush"><var>N</var></dt><dd><p>  Number of nodes of the final graph.</p></dd>
<dt class="flush"><var>m</var></dt><dd><p>  Number of edges created by each new node.</p></dd>
<dt class="flush"><var>n0</var></dt><dd><p>  Number of nodes in the initial (seed) graph.</p></dd>
<dt class="flush">SHOW</dt><dd><p>  If the fourth parameter is equal to <code>SHOW</code>, the values of node
  attractiveness are printed on STDERR.</p></dd>
</dl>


<h2 id="OUTPUT">OUTPUT</h2>

<p><code>bb_fitness</code> prints on STDOUT the edge list of the final graph.</p>

<h2 id="EXAMPLES">EXAMPLES</h2>

<p>The following command:</p>

<pre><code>    $ bb_fitness 10000 3 4 &gt; bb_fitness_10000_3_4.txt
</code></pre>

<p>uses the fitness model to create a random graph with <var>N=10000</var> nodes,
where each new node creates <var>m=3</var> new edges and the initial seed
network is a ring of <var>n0=5</var> nodes. The edge list of the resulting
graph is saved in the file <code>bb_fitness_10000_3_4.txt</code> (notice the
redirection operator <code>&gt;</code>). The command:</p>

<pre><code>    $ bb_fitness 10000 3 4 SHOW &gt; bb_fitness_10000_3_4.txt 2&gt; bb_fitness_10000_3_4.txt_fitness
</code></pre>

<p>will do the same as above, but it will additionally save the values of
node fitness in the file <code>bb_fitness_10000_3_4.txt_fitness</code> (notice
the redirection operator <code>2&gt;</code>, that redirects the STDERR to the
specified file).</p>

<h2 id="SEE-ALSO">SEE ALSO</h2>

<p><span class="man-ref">ba<span class="s">(1)</span></span>, <span class="man-ref">dms<span class="s">(1)</span></span></p>

<h2 id="REFERENCES">REFERENCES</h2>

<ul>
<li><p>G. Bianconi, A.-L. Barabasi, " Competition and multiscaling in
evolving networks". EPL-Europhys. Lett. 54 (2001), 436.</p></li>
<li><p>V. Latora, V. Nicosia, G. Russo, "Complex Networks: Principles,
Methods and Applications", Chapter 6, Cambridge University Press
(2017)</p></li>
<li><p>V. Latora, V. Nicosia, G. Russo, "Complex Networks: Principles,
Methods and Applications", Appendix 13, Cambridge University Press
(2017)</p></li>
</ul>


<h2 id="AUTHORS">AUTHORS</h2>

<p>(c) Vincenzo 'KatolaZ' Nicosia 2009-2017 <code>&lt;v.nicosia@qmul.ac.uk&gt;</code>.</p>


  <ol class='man-decor man-foot man foot'>
    <li class='tl'>www.complex-networks.net</li>
    <li class='tc'>September 2017</li>
    <li class='tr'>bb_fitness(1)</li>
  </ol>

  </div>
</body>
</html>